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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919312.1_cds_XP_016468547.1_61174
CDS Infomation

[gene=LOC107791065] [db_xref=GeneID:107791065] [protein=tryptophan--tRNA ligase, chloroplastic/mitochondrial-like isoform X4] [protein_id=XP_016468547.1] [location=join(15789..15895,16036..16123,17126..17167,18671..18760,18842..18964,20333..20404,20639..20751,20899..20920,21017..21082,21255..21311,22531..22577,22803..22884,23847..23936,25046..25180)] [gbkey=CDS]
Sequence

ATGAACACCTTCATCAAGAAGTTATGTAGTTGTTGGGCAAGCACCAAGATATGGAGAAAT
GTATTGCTTGTGGTTGATGGTACCAAGAGGCATTATCTGAACCTCAAGAAGAGAATAGTC
TCTGGTGTTCAGCCTACAGGATTGATACATCTGGGAAATTATCTTGGTGCCATAAAGAAC
TGGATACGCTTGCAGGATACATATGAGACATTCTTCTTCATTGTGGACCTTCATGCGATA
ACTTTGCCATATGACGCACAACAATTGCCAAGGTCAACAAGGGATACAGCTGCTATTTAT
TTAGCATGTGGTGTGGATCCTTCTAAGGCTTCAGTCTTTGTGCAGTCTCATGTCCGTGCT
CATGTAGAGTTGATGTGGCTTTTGAGTTCTGCAACACCTATTGGTTGGCTCAACAGGATG
ATTCAATTTAAAGAGAAATCACGGAAGGCGGGGGATGAAAATGTGGGTGTTGCCCTTCTA
ACCTATCCTGTACTAATGGCTGCTGATATTCTTCTGTACCAGTCTGATTTTGTCCCTGTC
GGAGAGGATCAGAAGCAACACCTGGAGTTGACACGAGAGCTGGCTGAGCGTGTTAACTAT
TTATATGGAGGAAGGAAGTGGAAGAAACTGGGAGGGAGAGGCGGTTCAATCTTCAAGGTT
CCTGAGCCCCTTATTCCACCCGCTGGGGCTCGAATCATGTCCCTTACTGATGGTCTTTCC
AAGATGTCGAAGTCAGCACCATCTGATCAGTCGAGAATCAATTTGCTAGATTCAAAAGAT
GTAATAGCAAATAAGATAAAACGGTGCAAGACTGATTCGTTTCCTGGCATGGAGTTTGAC
AATCCGGAAAGACCTGAATGTAACAATCTTCTTTCTATTTATCAGCTAGTTACAGGCAAG
ACCAAGCAGGAAGTTGCAGAAGAATGCAGAGATATGAATTGGGGAACGTTCAAACTCGTG
CTTACAGATGCTTTAGTTGATCATCTACACCCTATCCAGGTACGCTATGAGGAAATTGTA
TCAGACGCAAGTTACTTGGATGGAGTCCTGGCAGAGGGAGCCAGAAAAGCAGCAGATGTA
GCAGATGTTACTGTCAATAATGTCTACCAGGCAATGGGATTCTTGAGGAGATGA

Peptide Sequence

PEP ID

XP_016468547.1
PEP Infomation

PREDICTED: tryptophan--tRNA ligase, chloroplastic/mitochondrial-like isoform X4 [Nicotiana tabacum]
Sequence

MNTFIKKLCSCWASTKIWRNVLLVVDGTKRHYLNLKKRIVSGVQPTGLIHLGNYLGAIKN
WIRLQDTYETFFFIVDLHAITLPYDAQQLPRSTRDTAAIYLACGVDPSKASVFVQSHVRA
HVELMWLLSSATPIGWLNRMIQFKEKSRKAGDENVGVALLTYPVLMAADILLYQSDFVPV
GEDQKQHLELTRELAERVNYLYGGRKWKKLGGRGGSIFKVPEPLIPPAGARIMSLTDGLS
KMSKSAPSDQSRINLLDSKDVIANKIKRCKTDSFPGMEFDNPERPECNNLLSIYQLVTGK
TKQEVAEECRDMNWGTFKLVLTDALVDHLHPIQVRYEEIVSDASYLDGVLAEGARKAADV
ADVTVNNVYQAMGFLRR

Transcript Sequence

Gene sequence data has not been registered.